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9 May 2008

Laura M. Rendl, Melissa A. Bieman, and Craig A. Smibert

S. cerevisiae Vts1p induces deadenylation-dependent transcript degradation and interacts with the Ccr4p-Pop2p-Not deadenylase complex
RNA Published May 9, 2008, 10.1261/rna.955508 [Abstract] [PDF] [Supplemental Research Data]  

7 May 2008

Dominic Didiano and Oliver Hobert

Molecular architecture of a miRNA-regulated 3' UTR
RNA Published May 7, 2008, 10.1261/rna.1082708 [Abstract] [PDF] [Supplemental Research Data] OPEN ACCESS ARTICLE  

2 May 2008

Hal P. Bogerd and Bryan R. Cullen

Single-stranded RNA facilitates nucleocapsid: APOBEC3G complex formation
RNA Published May 2, 2008, 10.1261/rna.964708 [Abstract] [PDF] [Supplemental Research Data]  

José Miguel García, Vanesa García, Cristina Peña, Gemma Domínguez, Javier Silva, Raquel Diaz, Pablo Espinosa, Maria Jesús Citores, Manuel Collado, and Félix Bonilla

Extracellular plasma RNA from colon cancer patients is confined in a vesicle-like structure and is mRNA-enriched
RNA Published May 2, 2008, 10.1261/rna.755908 [Abstract] [PDF]  

Jean-Denis Beaudoin and Jean-Pierre Perreault

Potassium ions modulate a G-quadruplex-ribozyme's activity
RNA Published May 2, 2008, 10.1261/rna.963908 [Abstract] [PDF] OPEN ACCESS ARTICLE  

Feng Ding, Shantanu Sharma, Poornima Chalasani, Vadim V. Demidov, Natalia E. Broude, and Nikolay V. Dokholyan

Ab initio RNA folding by discrete molecular dynamics: From structure prediction to folding mechanisms
RNA Published May 2, 2008, 10.1261/rna.894608 [Abstract] [PDF] [Supplemental Research Data]  

Dasaradhi Palakodeti, Magda Smielewska, Yi-Chien Lu, Gene W. Yeo, and Brenton R. Graveley

The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians
RNA Published May 2, 2008, 10.1261/rna.1085008 [Abstract] [PDF] [Supplemental Research Data]  

Laura A. Copela, Cesar F. Fernandez, R. Lynn Sherrer, and Sandra L. Wolin

Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation
RNA Published May 2, 2008, 10.1261/rna.1050408 [Abstract] [PDF]  

25 April 2008

Michelle L. Ammerman, John C. Fisk, and Laurie K. Read

gRNA/pre-mRNA annealing and RNA chaperone activities of RBP16
RNA Published April 25, 2008, 10.1261/rna.982908 [Abstract] [PDF]  

Elena Iakhiaeva, Jacek Wower, Iwona K. Wower, and Christian Zwieb

The 5e motif of eukaryotic signal recognition particle RNA contains a conserved adenosine for the binding of SRP72
RNA Published April 25, 2008, 10.1261/rna.979508 [Abstract] [PDF]  

Minjung Kim, Bhavita Patel, Kourtney E. Schroeder, Abbas Raza, and Jeff Dejong

Organization and transcriptional output of a novel mRNA-like piRNA gene (mpiR) located on mouse chromosome 10
RNA Published April 25, 2008, 10.1261/rna.974608 [Abstract] [PDF]  

Olga Fedorova and Anna Marie Pyle

A conserved element that stabilizes the group II intron active site
RNA Published April 25, 2008, 10.1261/rna.942308 [Abstract] [PDF] OPEN ACCESS ARTICLE  

Aleks Schein, Sharon Sheffy-Levin, Fabian Glaser, and Gadi Schuster

The RNase E/G-type endoribonuclease of higher plants is located in the chloroplast and cleaves RNA similarly to the E. coli enzyme
RNA Published April 25, 2008, 10.1261/rna.907608 [Abstract] [PDF]  

Julie A. Law, Sean F. O'Hearn, and Barbara Sollner-Webb

Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion
RNA Published April 25, 2008, 10.1261/rna.899508 [Abstract] [PDF]  

Ilia Targanski and Vera Cherkasova

Analysis of genomic tRNA sets from Bacteria, Archaea, and Eukarya points to anticodon–codon hydrogen bonds as a major determinant of tRNA compositional variations
RNA Published April 25, 2008, 10.1261/rna.896108 [Abstract] [PDF]  

Elias Seif and Sidney Altman

RNase P cleaves the adenine riboswitch and stabilizes pbuE mRNA in Bacillus subtilis
RNA Published April 25, 2008, 10.1261/rna.833408 [Abstract] [PDF] [Supplemental Research Data]  

Kristi D. Viles and Bruce A. Sullenger

Proximity-dependent and proximity-independent trans-splicing in mammalian cells
RNA Published April 25, 2008, 10.1261/rna.384808 [Abstract] [PDF]  

Shin Miyakawa, Yusuke Nomura, Taiichi Sakamoto, Yoshiki Yamaguchi, Koichi Kato, Satoko Yamazaki, and Yoshikazu Nakamura

Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G
RNA Published April 25, 2008, 10.1261/rna.1005808 [Abstract] [PDF]  

22 April 2008

Joanna Kowalska, Magdalena Lewdorowicz, Joanna Zuberek, Ewa Grudzien-Nogalska, Elzbieta Bojarska, Janusz Stepinski, Robert E. Rhoads, Edward Darzynkiewicz, Richard E. Davis, and Jacek Jemielity

Synthesis and characterization of mRNA cap analogs containing phosphorothioate substitutions that bind tightly to eIF4E and are resistant to the decapping pyrophosphatase DcpS
RNA Published April 22, 2008, 10.1261/rna.990208 [Abstract] [PDF]  

Sabine Rüdel, Andrew Flatley, Lasse Weinmann, Elisabeth Kremmer, and Gunter Meister

A multifunctional human Argonaute2-specific monoclonal antibody
RNA Published April 22, 2008, 10.1261/rna.973808 [Abstract] [PDF]  

Eva M. Riedmann, Sandy Schopoff, Jochen C. Hartner, and Michael F. Jantsch

Specificity of ADAR-mediated RNA editing in newly identified targets
RNA Published April 22, 2008, 10.1261/rna.923308 [Abstract] [PDF] [Supplemental Research Data]  

Jesse C. Cochrane and Scott A. Strobel

Riboswitch effectors as protein enzyme cofactors
RNA Published April 22, 2008, 10.1261/rna.908408 [Abstract] [PDF]  

Mike Harris

Ribozymes and RNA Catalysis, edited by David M. Lilly and Fritz Eckstein. 2007. RSC Publishing, Cambridge, UK. ISBN (online): 978-1-84755-798-8, ISBN (print): 978-0-85404-253-1.
RNA Published April 22, 2008, 10.1261/rna.1047008 [PDF]  

21 April 2008

Xiaowei Wang

miRDB: A microRNA target prediction and functional annotation database with a wiki interface
RNA Published April 21, 2008, 10.1261/rna.965408 [Abstract] [PDF]  

Hannah L. Townsend, Babal K. Jha, Jian-Qiu Han, N. Karl Maluf, Robert H. Silverman, and David J. Barton

A viral RNA competitively inhibits the antiviral endoribonuclease domain of RNase L
RNA Published April 21, 2008, 10.1261/rna.958908 [Abstract] [PDF]  

Susan E. Wurster and L. James Maher III

Selection and characterization of anti-NF-B p65 RNA aptamers
RNA Published April 21, 2008, 10.1261/rna.878908 [Abstract] [PDF]  

Vincent Shen, Hudan Liu, Shin-Wu Liu, Xinfu Jiao, and Megerditch Kiledjian

DcpS scavenger decapping enzyme can modulate pre-mRNA splicing
RNA Published April 21, 2008, 10.1261/rna.1008208 [Abstract] [PDF] [Supplemental Research Data]  

Subba Rao Nallagatla and Philip C. Bevilacqua

Nucleoside modifications modulate activation of the protein kinase PKR in an RNA structure-specific manner
RNA Published April 21, 2008, 10.1261/rna.1007408 [Abstract] [PDF]  

To see an article, click its [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.