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BIOINFORMATICS

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BIOINFORMATICS:
Predicting helical coaxial stacking in RNA multibranch loops
- Rahul Tyagi
- and David H. Mathews
RNA July 2007 13:939-951; Published in Advance May 16, 2007, doi:10.1261/rna.305307
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BIOINFORMATICS:
Evolution of the iron-responsive element
- Paul Piccinelli
- and Tore Samuelsson
RNA July 2007 13:952-966; Published in Advance May 18, 2007, doi:10.1261/rna.464807

REPORTS

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REPORT:
Cysteine of sequence motif VI is essential for nucleophilic catalysis by yeast tRNA m⁵C methyltransferase
- Hélène Walbott,
- Clotilde Husson,
- Sylvie Auxilien,
- and Béatrice Golinelli-Pimpaneau
RNA July 2007 13:967-973; Published in Advance May 2, 2007, doi:10.1261/rna.515707
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REPORT:
Translation of the synaptonemal complex component Sycp3 is enhanced in vivo by the germ cell specific regulator Dazl
- Nicola Reynolds,
- Brian Collier,
- Victoria Bingham,
- Nicola K. Gray,
- and Howard J. Cooke
RNA July 2007 13:974-981; Published in Advance May 25, 2007, doi:10.1261/rna.465507

BIOINFORMATICS

Predicting helical coaxial stacking in RNA multibranch loops

Evolution of the iron-responsive element

REPORTS

Cysteine of sequence motif VI is essential for nucleophilic catalysis by yeast tRNA m⁵C methyltransferase

Translation of the synaptonemal complex component Sycp3 is enhanced in vivo by the germ cell specific regulator Dazl

ARTICLES

Widespread use of poly(A) tail length control to accentuate expression of the yeast transcriptome

The decapping activator Lsm1p-7p–Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs

Selection of an improved RNA polymerase ribozyme with superior extension and fidelity

Human cell growth requires a functional cytoplasmic exosome, which is involved in various mRNA decay pathways

G-ribo motif favors the formation of pseudoknots in ribosomal RNA

X-ray crystallographic and NMR studies of protein–protein and protein–nucleic acid interactions involving the KH domains from human poly(C)-binding protein-2

A comparison of vanadate to a 2′–5′ linkage at the active site of a small ribozyme suggests a role for water in transition-state stabilization

The C-terminal domain of RNA Pol II helps ensure that editing precedes splicing of the GluR-B transcript

The NS3 protein of Rice hoja blanca tenuivirus suppresses RNA silencing in plant and insect hosts by efficiently binding both siRNAs and miRNAs

Genes misregulated in C. elegans deficient in Dicer, RDE-4, or RDE-1 are enriched for innate immunity genes

Specific trans-acting proteins interact with auxiliary RNA polyadenylation elements in the COX-2 3′-UTR

Identification of mRNAs that continue to associate with polysomes during hypoxia

Depletion of newly synthesized Argonaute1 impairs the RNAi response in Trypanosoma brucei

This Issue

Current Issue

Table of Contents

BIOINFORMATICS

Predicting helical coaxial stacking in RNA multibranch loops

Evolution of the iron-responsive element

REPORTS

Cysteine of sequence motif VI is essential for nucleophilic catalysis by yeast tRNA m5C methyltransferase

Translation of the synaptonemal complex component Sycp3 is enhanced in vivo by the germ cell specific regulator Dazl

ARTICLES

Widespread use of poly(A) tail length control to accentuate expression of the yeast transcriptome

The decapping activator Lsm1p-7p–Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs

Selection of an improved RNA polymerase ribozyme with superior extension and fidelity

Human cell growth requires a functional cytoplasmic exosome, which is involved in various mRNA decay pathways

G-ribo motif favors the formation of pseudoknots in ribosomal RNA

X-ray crystallographic and NMR studies of protein–protein and protein–nucleic acid interactions involving the KH domains from human poly(C)-binding protein-2

A comparison of vanadate to a 2′–5′ linkage at the active site of a small ribozyme suggests a role for water in transition-state stabilization

The C-terminal domain of RNA Pol II helps ensure that editing precedes splicing of the GluR-B transcript

The NS3 protein of Rice hoja blanca tenuivirus suppresses RNA silencing in plant and insect hosts by efficiently binding both siRNAs and miRNAs

Genes misregulated in C. elegans deficient in Dicer, RDE-4, or RDE-1 are enriched for innate immunity genes

Specific trans-acting proteins interact with auxiliary RNA polyadenylation elements in the COX-2 3′-UTR

Identification of mRNAs that continue to associate with polysomes during hypoxia

Depletion of newly synthesized Argonaute1 impairs the RNAi response in Trypanosoma brucei

This Issue

Current Issue

Cysteine of sequence motif VI is essential for nucleophilic catalysis by yeast tRNA m⁵C methyltransferase