Bioinformatics:

Dorota Piekna-Przybylska, Wayne A. Decatur, and Maurille J. Fournier

New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA
RNA 2007 13: 305-312. Published in Advance February 5, 2007 , 10.1261/rna.373107 [Abstract] [Full Text] [PDF]  

Reports:

Xuezhong Cai and Bryan R. Cullen

The imprinted H19 noncoding RNA is a primary microRNA precursor
RNA 2007 13: 313-316. Published in Advance January 19, 2007 , 10.1261/rna.351707 [Abstract] [Full Text] [PDF]  

Mónica Amblar, Ana Barbas, Paulino Gomez-Puertas, and Cecília M. Arraiano

The role of the S1 domain in exoribonucleolytic activity: Substrate specificity and multimerization
RNA 2007 13: 317-327. Published in Advance January 22, 2007 , 10.1261/rna.220407 [Abstract] [Full Text] [PDF]  

Articles:

Dipali G. Sashital, Vincenzo Venditti, Cortney G. Angers, Gabriel Cornilescu, and Samuel E. Butcher

Structure and thermodynamics of a conserved U2 snRNA domain from yeast and human
RNA 2007 13: 328-338. Published in Advance January 22, 2007 , 10.1261/rna.418407 [Abstract] [Full Text] [PDF]  

Jean-FranÇois Lemay and Daniel A. Lafontaine

Core requirements of the adenine riboswitch aptamer for ligand binding
RNA 2007 13: 339-350. Published in Advance January 2, 2007 , 10.1261/rna.142007 [Abstract] [Full Text] [PDF]  

Stephen J. Headey, He Huang, Jolyon K. Claridge, Giselle A. Soares, Kaushik Dutta, Martin Schwalbe, Daiwen Yang, and Steven M. Pascal

NMR structure of stem–loop D from human rhinovirus-14
RNA 2007 13: 351-360. Published in Advance December 28, 2006 , 10.1261/rna.313707 [Abstract] [Full Text] [PDF]  

Kristina L. Carroll, Rodolfo Ghirlando, Jessica M. Ames, and Jeffry L. Corden

Interaction of yeast RNA-binding proteins Nrd1 and Nab3 with RNA polymerase II terminator elements
RNA 2007 13: 361-373. Published in Advance February 5, 2007 , 10.1261/rna.338407 [Abstract] [Full Text] [PDF]  

Marco Nousch, Victoria Reed, Robert J. Bryson-Richardson, Peter D. Currie, and Thomas Preiss

The eIF4G–homolog p97 can activate translation independent of caspase cleavage
RNA 2007 13: 374-384. Published in Advance January 19, 2007 , 10.1261/rna.372307 [Abstract] [Full Text] [PDF]  

Lourdes M. Alemán, John Doench, and Phillip A. Sharp

Comparison of siRNA-induced off-target RNA and protein effects
RNA 2007 13: 385-395. Published in Advance January 19, 2007 , 10.1261/rna.352507 [Abstract] [Full Text] [PDF]  

Rebecca Guymon, Steven C. Pomerantz, J. Nicholas Ison, Pamela F. Crain, and James A. McCloskey

Post-transcriptional modifications in the small subunit ribosomal RNA from Thermotoga maritima, including presence of a novel modified cytidine
RNA 2007 13: 396-403. Published in Advance January 25, 2007 , 10.1261/rna.361607 [Abstract] [Full Text] [PDF]  

Martha L. Wilkinson, Sharon M. Crary, Jane E. Jackman, Elizabeth J. Grayhack, and Eric M. Phizicky

The 2'-O-methyltransferase responsible for modification of yeast tRNA at position 4
RNA 2007 13: 404-413. Published in Advance January 22, 2007 , 10.1261/rna.399607 [Abstract] [Full Text] [PDF]  

Methods:

M. Julieta Del Prete, Rolando Vernal, Helmut Dolznig, Ernst W. Müllner, and Jose A. Garcia-Sanz

Isolation of polysome-bound mRNA from solid tissues amenable for RT-PCR and profiling experiments
RNA 2007 13: 414-421. Published in Advance January 19, 2007 , 10.1261/rna.79407 [Abstract] [Full Text] [PDF]  

Antti P. Aalto, L. Peter Sarin, Alberdina A. van Dijk, Mart Saarma, Minna M. Poranen, Urmas Arumäe, and Dennis H. Bamford

Large-scale production of dsRNA and siRNA pools for RNA interference utilizing bacteriophage 6 RNA-dependent RNA polymerase
RNA 2007 13: 422-429. Published in Advance January 19, 2007 , 10.1261/rna.348307 [Abstract] [Full Text] [PDF]  

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