Table of Contents

October 2007; 13 (10)

MINI-REVIEW

  • MINI-REVIEW:

    The birth of new exons: Mechanisms and evolutionary consequences

    • Rotem Sorek
    RNA October 2007 13:1603-1608; Published in Advance August 20, 2007, doi:10.1261/rna.682507

REVIEW

  • REVIEW:

    Antisense-mediated exon skipping: A versatile tool with therapeutic and research applications

    • Annemieke Aartsma-Rus
    • and Gert-Jan B. van Ommen
    RNA October 2007 13:1609-1624; Published in Advance August 7, 2007, doi:10.1261/rna.653607
    OPEN ACCESS ARTICLE

LETTER TO THE EDITOR

  • LETTER TO THE EDITOR:

    The tolerance to exchanges of the Watson–Crick base pair in the hammerhead ribozyme core is determined by surrounding elements

    • Rita Przybilski
    • and Christian Hammann
    RNA October 2007 13:1625-1630; Published in Advance July 31, 2007, doi:10.1261/rna.631207

BIOINFORMATICS

  • BIOINFORMATICS:

    Effect of target secondary structure on RNAi efficiency

    • Yu Shao,
    • Chi Yu Chan,
    • Anil Maliyekkel,
    • Charles E. Lawrence,
    • Igor B. Roninson,
    • and Ye Ding
    RNA October 2007 13:1631-1640; Published in Advance August 7, 2007, doi:10.1261/rna.546207

REPORTS

  • REPORT:

    The Saccharomyces cerevisiae Pus2 protein encoded by YGL063w ORF is a mitochondrial tRNA:Ψ27/28-synthase

    • Isabelle Behm-Ansmant,
    • Christiane Branlant,
    • and Yuri Motorin
    RNA October 2007 13:1641-1647; Published in Advance August 7, 2007, doi:10.1261/rna.605607
  • REPORT:

    Specific binding of a Pop6/Pop7 heterodimer to the P3 stem of the yeast RNase MRP and RNase P RNAs

    • Anna Perederina,
    • Olga Esakova,
    • Hasan Koc,
    • Mark E. Schmitt,
    • and Andrey S. Krasilnikov
    RNA October 2007 13:1648-1655; Published in Advance August 23, 2007, doi:10.1261/rna.654407

ARTICLES

  • ARTICLE:

    Modulation of individual steps in group I intron catalysis by a peripheral metal ion

    • Marcello Forconi,
    • Joseph A. Piccirilli,
    • and Daniel Herschlag
    RNA October 2007 13:1656-1667; Published in Advance August 24, 2007, doi:10.1261/rna.632007
  • ARTICLE:

    Systematic analysis of microRNA expression of RNA extracted from fresh frozen and formalin-fixed paraffin-embedded samples

    • Yaguang Xi,
    • Go Nakajima,
    • Elaine Gavin,
    • Chris G. Morris,
    • Kenji Kudo,
    • Kazuhiko Hayashi,
    • and Jingfang Ju
    RNA October 2007 13:1668-1674; Published in Advance August 13, 2007, doi:10.1261/rna.642907
  • ARTICLE:

    Nuclear factors are involved in hepatitis C virus RNA replication

    • Olaf Isken,
    • Martina Baroth,
    • Claus W. Grassmann,
    • Susan Weinlich,
    • Dirk H. Ostareck,
    • Antje Ostareck-Lederer,
    • and Sven-Erik Behrens
    RNA October 2007 13:1675-1692; Published in Advance August 7, 2007, doi:10.1261/rna.594207
  • ARTICLE:

    Cloning and expression profiling of testis-expressed piRNA-like RNAs

    • Seungil Ro,
    • Chanjae Park,
    • Rui Song,
    • Dan Nguyen,
    • Jingling Jin,
    • Kenton M. Sanders,
    • John R. McCarrey,
    • and Wei Yan
    RNA October 2007 13:1693-1702; Published in Advance August 13, 2007, doi:10.1261/rna.640307
  • ARTICLE:

    Improved amber and opal suppressor tRNAs for incorporation of unnatural amino acids in vivo. Part 1: Minimizing misacylation

    • Erik A. Rodriguez,
    • Henry A. Lester,
    • and Dennis A. Dougherty
    RNA October 2007 13:1703-1714; Published in Advance August 13, 2007, doi:10.1261/rna.666807
  • ARTICLE:

    Improved amber and opal suppressor tRNAs for incorporation of unnatural amino acids in vivo. Part 2: Evaluating suppression efficiency

    • Erik A. Rodriguez,
    • Henry A. Lester,
    • and Dennis A. Dougherty
    RNA October 2007 13:1715-1722; Published in Advance August 13, 2007, doi:10.1261/rna.667607
  • ARTICLE:

    A functional interaction of SmpB with tmRNA for determination of the resuming point of trans-translation

    • Takayuki Konno,
    • Daisuke Kurita,
    • Kazuma Takada,
    • Akira Muto,
    • and Hyouta Himeno
    RNA October 2007 13:1723-1731; Published in Advance August 13, 2007, doi:10.1261/rna.604907
  • ARTICLE:

    Alternative splicing of the ADAR1 transcript in a region that functions either as a 5′-UTR or an ORF

    • Søren Lykke-Andersen,
    • Serafín Piñol-Roma,
    • and Jørgen Kjems
    RNA October 2007 13:1732-1744; Published in Advance August 13, 2007, doi:10.1261/rna.567807
  • ARTICLE:

    Phosphorothioate cap analogs stabilize mRNA and increase translational efficiency in mammalian cells

    • Ewa Grudzien-Nogalska,
    • Jacek Jemielity,
    • Joanna Kowalska,
    • Edward Darzynkiewicz,
    • and Robert E. Rhoads
    RNA October 2007 13:1745-1755; Published in Advance August 24, 2007, doi:10.1261/rna.701307
  • ARTICLE:

    Polyadenylation site choice in yeast is affected by competition between Npl3 and polyadenylation factor CFI

    • Miriam E. Bucheli,
    • Xiaoyuan He,
    • Craig D. Kaplan,
    • Claire L. Moore,
    • and Stephen Buratowski
    RNA October 2007 13:1756-1764; Published in Advance August 7, 2007, doi:10.1261/rna.607207
  • ARTICLE:

    Defining the optimal parameters for hairpin-based knockdown constructs

    • Leiming Li,
    • Xiaoyu Lin,
    • Anastasia Khvorova,
    • Stephen W. Fesik,
    • and Yu Shen
    RNA October 2007 13:1765-1774; Published in Advance August 13, 2007, doi:10.1261/rna.599107
    OPEN ACCESS ARTICLE

METHODS

  • METHOD:

    Versatile applications of transcriptional pulsing to study mRNA turnover in mammalian cells

    • Chyi-Ying A. Chen,
    • Yukiko Yamashita,
    • Tsung-Cheng Chang,
    • Akio Yamashita,
    • Wenmiao Zhu,
    • Zhenping Zhong,
    • and Ann-Bin Shyu
    RNA October 2007 13:1775-1786; Published in Advance August 29, 2007, doi:10.1261/rna.663507
  • METHOD:

    A novel monoclonal antibody against human Argonaute proteins reveals unexpected characteristics of miRNAs in human blood cells

    • Peter T. Nelson,
    • Mariangels De Planell-Saguer,
    • Stella Lamprinaki,
    • Marianthi Kiriakidou,
    • Paul Zhang,
    • Una O'Doherty,
    • and Zissimos Mourelatos
    RNA October 2007 13:1787-1792; Published in Advance August 24, 2007, doi:10.1261/rna.646007
  • METHOD:

    Instrumentation and metrology for single RNA counting in biological complexes or nanoparticles by a single-molecule dual-view system

    • Hui Zhang,
    • Dan Shu,
    • Faqing Huang,
    • and Peixuan Guo
    RNA October 2007 13:1793-1802; Published in Advance August 13, 2007, doi:10.1261/rna.587607
  • METHOD:

    A simple array platform for microRNA analysis and its application in mouse tissues

    • Xiaoqing Tang,
    • Jozsef Gal,
    • Xun Zhuang,
    • Wangxia Wang,
    • Haining Zhu,
    • and Guiliang Tang
    RNA October 2007 13:1803-1822; Published in Advance August 3, 2007, doi:10.1261/rna.498607
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This Issue

October 2007; 13 (10)
Cover
  1. MINI-REVIEW
  2. REVIEW
  3. LETTER TO THE EDITOR
  4. BIOINFORMATICS
  5. REPORTS
  6. ARTICLES
  7. METHODS

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