Letters to the Editor:

Kristian E. Baker and Roy Parker

Conventional 3' end formation is not required for NMD substrate recognition in Saccharomyces cerevisiae
RNA 2006 12: 1441-1445. Published in Advance June 29, 2006 , 10.1261/rna.92706 [Abstract] [Full Text] [PDF]  

Dongmei Lai, Denny Sakkas, and Yingqun Huang

The fragile X mental retardation protein interacts with a distinct mRNA nuclear export factor NXF2
RNA 2006 12: 1446-1449. Published in Advance June 21, 2006 , 10.1261/rna.94306 [Abstract] [Full Text] [PDF]  

Bioinformatics:

Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L. Jernigan, Vasant Honavar, and Drena Dobbs

Prediction of RNA binding sites in proteins from amino acid sequence
RNA 2006 12: 1450-1462. Published in Advance June 21, 2006 , 10.1261/rna.2197306 [Abstract] [Full Text] [PDF]  

Reports:

Eric L. Christian, Kari M.J. Smith, Nicholas Perera, and Michael E. Harris

The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning
RNA 2006 12: 1463-1467. Published in Advance July 5, 2006 , 10.1261/rna.158606 [Abstract] [Full Text] [PDF]  

Chunling Gong, Paul Smith, and Stewart Shuman

Structure–function analysis of Plasmodium RNA triphosphatase and description of a triphosphate tunnel metalloenzyme superfamily that includes Cet1-like RNA triphosphatases and CYTH proteins
RNA 2006 12: 1468-1474. Published in Advance June 29, 2006 , 10.1261/rna.119806 [Abstract] [Full Text] [PDF]  

Articles:

Rebecca J. Richards, Haihong Wu, Lukas Trantirek, Catherine M. O'Connor, Kathleen Collins, and Juli Feigon

Structural study of elements of Tetrahymena telomerase RNA stem–loop IV domain important for function
RNA 2006 12: 1475-1485. Published in Advance June 29, 2006 , 10.1261/rna.112306 [Abstract] [Full Text] [PDF]  

Yi-Tzu Lin and Pauline H. Yen

A novel nucleocytoplasmic shuttling sequence of DAZAP1, a testis-abundant RNA-binding protein
RNA 2006 12: 1486-1493. Published in Advance June 13, 2006 , 10.1261/rna.42206 [Abstract] [Full Text] [PDF]  

Ralf Trippe, Elena Guschina, Markus Hossbach, Henning Urlaub, Reinhard Lührmann, and Bernd-Joachim Benecke

Identification, cloning, and functional analysis of the human U6 snRNA-specific terminal uridylyl transferase
RNA 2006 12: 1494-1504. Published in Advance June 21, 2006 , 10.1261/rna.87706 [Abstract] [Full Text] [PDF]  

Maxim V. Sukhodolets, Susan Garges, and Sankar Adhya

Ribosomal protein S1 promotes transcriptional cycling
RNA 2006 12: 1505-1513. Published in Advance June 14, 2006 , 10.1261/rna.2321606 [Abstract] [Full Text] [PDF]  

Xiang Liu, Feng Jiang, Savitha Kalidas, Dean Smith, and Qinghua Liu

Dicer-2 and R2D2 coordinately bind siRNA to promote assembly of the siRISC complexes
RNA 2006 12: 1514-1520. Published in Advance June 14, 2006 , 10.1261/rna.101606 [Abstract] [Full Text] [PDF]  

Sarah D. Linnstaedt, Wojciech K. Kasprzak, Bruce A. Shapiro, and John L. Casey

The role of a metastable RNA secondary structure in hepatitis delta virus genotype III RNA editing
RNA 2006 12: 1521-1533. Published in Advance June 21, 2006 , 10.1261/rna.89306 [Abstract] [Full Text] [PDF]  

Anita Nag, Kazim Narsinh, Amir Kazerouninia, and Harold G. Martinson

The conserved AAUAAA hexamer of the poly(A) signal can act alone to trigger a stable decrease in RNA polymerase II transcription velocity
RNA 2006 12: 1534-1544. Published in Advance June 14, 2006 , 10.1261/rna.103206 [Abstract] [Full Text] [PDF]  

Christopher C. Goulah, Michel Pelletier, and Laurie K. Read

Arginine methylation regulates mitochondrial gene expression in Trypanosoma brucei through multiple effector proteins
RNA 2006 12: 1545-1555. Published in Advance June 14, 2006 , 10.1261/rna.90106 [Abstract] [Full Text] [PDF]  

Juan José Berlanga, Alexis Baass, and Nahum Sonenberg

Regulation of poly(A) binding protein function in translation: Characterization of the Paip2 homolog, Paip2B
RNA 2006 12: 1556-1568. Published in Advance June 27, 2006 , 10.1261/rna.106506 [Abstract] [Full Text] [PDF]  

Mervi T. Hyvönen, Anne Uimari, Tuomo A. Keinänen, Sami Heikkinen, Riikka Pellinen, Tiina Wahlfors, Arja Korhonen, Ale Närvänen, Jarmo Wahlfors, Leena Alhonen, and Juhani Jänne

Polyamine-regulated unproductive splicing and translation of spermidine/spermine N¹-acetyltransferase
RNA 2006 12: 1569-1582. Published in Advance June 29, 2006 , 10.1261/rna.39806 [Abstract] [Full Text] [PDF]  

Isabelle Behm-Ansmant, Séverine Massenet, FranÇoise Immel, Jeffrey R. Patton, Yuri Motorin, and Christiane Branlant

A previously unidentified activity of yeast and mouse RNA:pseudouridine synthases 1 (Pus1p) on tRNAs
RNA 2006 12: 1583-1593. Published in Advance June 27, 2006 , 10.1261/rna.100806 [Abstract] [Full Text] [PDF]  

Methods:

Daniel Seay, Brad Hook, Katie Evans, and Marvin Wickens

A three-hybrid screen identifies mRNAs controlled by a regulatory protein
RNA 2006 12: 1594-1600. Published in Advance June 29, 2006 , 10.1261/rna.145306 [Abstract] [Full Text] [PDF]  

Erratum:

ERRATUM
RNA 2006 12: 1601. [Full Text] [PDF]  

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