Hypothesis:

Yanglong Zhu, Vilius Stribinskis, Kenneth S. Ramos, and Yong Li

Sequence analysis of RNase MRP RNA reveals its origination from eukaryotic RNase P RNA
RNA 2006 12: 699-706. Published in Advance March 15, 2006 , 10.1261/rna.2284906 [Abstract] [Full Text] [PDF]  

Letters to the Editor:

Donald B. Bloch, Tod Gulick, Kenneth D. Bloch, and Wei-Hong Yang

Processing body autoantibodies reconsidered
RNA 2006 12: 707-709. Published in Advance March 23, 2006 , 10.1261/rna.17406 [Abstract] [Full Text] [PDF]  

Reports:

Chung-Il An, Vu B. Trinh, and Yohei Yokobayashi

Artificial control of gene expression in mammalian cells by modulating RNA interference through aptamer–small molecule interaction
RNA 2006 12: 710-716. Published in Advance April 10, 2006 , 10.1261/rna.2299306 [Abstract] [Full Text] [PDF]  

Francis Robert, Hong Qing Gao, Marwa Donia, William C. Merrick, Mark T. Hamann, and Jerry Pelletier

Chlorolissoclimides: New inhibitors of eukaryotic protein synthesis
RNA 2006 12: 717-725. Published in Advance March 15, 2006 , 10.1261/rna.2346806 [Abstract] [Full Text] [PDF]  

Heather C. O'Farrell, Nagesh Pulicherla, Pooja M. Desai, and Jason P. Rife

Recognition of a complex substrate by the KsgA/Dim1 family of enzymes has been conserved throughout evolution
RNA 2006 12: 725-733. Published in Advance March 15, 2006 , 10.1261/rna.2310406 [Abstract] [Full Text] [PDF]  

Articles:

Adam Grundhoff, Christopher S. Sullivan, and Don Ganem

A combined computational and microarray-based approach identifies novel microRNAs encoded by human gamma-herpesviruses
RNA 2006 12: 733-750. Published in Advance March 15, 2006 , 10.1261/rna.2326106 [Abstract] [Full Text] [PDF]  

Lee D. Kapp, Sarah E. Kolitz, and Jon R. Lorsch

Yeast initiator tRNA identity elements cooperate to influence multiple steps of translation initiation
RNA 2006 12: 751-764. Published in Advance March 24, 2006 , 10.1261/rna.2263906 [Abstract] [Full Text] [PDF]  

Chun-Hong Chen, Der-I Kao, Shih-Peng Chan, Tsu-Chung Kao, Jui-Yen Lin, and Soo-Chen Cheng

Functional links between the Prp19-associated complex, U4/U6 biogenesis, and spliceosome recycling
RNA 2006 12: 765-774. Published in Advance March 15, 2006 , 10.1261/rna.2292106 [Abstract] [Full Text] [PDF]  

Rachel S. Lerner and Christopher V. Nicchitta

mRNA translation is compartmentalized to the endoplasmic reticulum following physiological inhibition of cap-dependent translation
RNA 2006 12: 775-789. Published in Advance March 15, 2006 , 10.1261/rna.2318906 [Abstract] [Full Text] [PDF]  

Arto Pulk, Ülo Maiväli, and Jaanus Remme

Identification of nucleotides in E. coli 16S rRNA essential for ribosome subunit association
RNA 2006 12: 790-796. Published in Advance March 23, 2006 , 10.1261/rna.2275906 [Abstract] [Full Text] [PDF]  

Laising Yen, Maxime Magnier, Ralph Weissleder, Brent R. Stockwell, and Richard C. Mulligan

Identification of inhibitors of ribozyme self-cleavage in mammalian cells via high-throughput screening of chemical libraries
RNA 2006 12: 797-806. Published in Advance March 23, 2006 , 10.1261/rna.2300406 [Abstract] [Full Text] [PDF]  

Greg S. Parker, Debra M. Eckert, and Brenda L. Bass

RDE-4 preferentially binds long dsRNA and its dimerization is necessary for cleavage of dsRNA to siRNA
RNA 2006 12: 807-818. Published in Advance April 7, 2006 , 10.1261/rna.2338706 [Abstract] [Full Text] [PDF]  

Reza Salavati, Nancy Lewis Ernst, Jeff O'Rear, Troy Gilliam, Salvador Tarun, Jr., and Kenneth Stuart

KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei
RNA 2006 12: 819-831. Published in Advance April 6, 2006 , 10.1261/rna.2244106 [Abstract] [Full Text] [PDF]  

Coralie Hoareau-Aveilla, Mattia Bonoli, Michele Caizergues-Ferrer, and Yves Henry

hNaf1 is required for accumulation of human box H/ACA snoRNPs, scaRNPs, and telomerase
RNA 2006 12: 832-840. Published in Advance April 6, 2006 , 10.1261/rna.2344106 [Abstract] [Full Text] [PDF]  

Mikhail M. Pooggin, Lyubov A. Ryabova, Xiaoyuan He, Johannes Fütterer, and Thomas Hohn

Mechanism of ribosome shunting in Rice tungro bacilliform pararetrovirus
RNA 2006 12: 841-850. Published in Advance March 23, 2006 , 10.1261/rna.2285806 [Abstract] [Full Text] [PDF]  

Jeremy R. Babendure, Jennie L. Babendure, Jian-Hua Ding, and Roger Y. Tsien

Control of mammalian translation by mRNA structure near caps
RNA 2006 12: 851-861. Published in Advance March 15, 2006 , 10.1261/rna.2309906 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE  

Tamara J. Brenner and Christine Guthrie

Assembly of Snu114 into U5 snRNP requires Prp8 and a functional GTPase domain
RNA 2006 12: 862-871. Published in Advance March 15, 2006 , 10.1261/rna.2319806 [Abstract] [Full Text] [PDF]  

Victor Fok, Rachel M. Mitton-Fry, Angie Grech, and Joan A. Steitz

Multiple domains of EBER 1, an Epstein-Barr virus noncoding RNA, recruit human ribosomal protein L22
RNA 2006 12: 872-882. Published in Advance March 23, 2006 , 10.1261/rna.2339606 [Abstract] [Full Text] [PDF]  

Jin-Yu Lu, Naomi Bergman, Navid Sadri, and Robert J. Schneider

Assembly of AUF1 with eIF4G–poly(A) binding protein complex suggests a translation function in AU-rich mRNA decay
RNA 2006 12: 883-893. Published in Advance March 23, 2006 , 10.1261/rna.2308106 [Abstract] [Full Text] [PDF]  

Alissa M. Lancaster, Eric Jan, and Peter Sarnow

Initiation factor-independent translation mediated by the hepatitis C virus internal ribosome entry site
RNA 2006 12: 894-902. Published in Advance March 23, 2006 , 10.1261/rna.2342306 [Abstract] [Full Text] [PDF]  

Heath A. Bowers, Patricia A. Maroney, Margaret E. Fairman, Berthold Kastner, Reinhard Lührmann, Timothy W. Nilsen, and Eckhard Jankowsky

Discriminatory RNP remodeling by the DEAD-box protein DED1
RNA 2006 12: 903-912. Published in Advance March 23, 2006 , 10.1261/rna.2323406 [Abstract] [Full Text] [PDF]  

Methods:

Mirco Castoldi, Sabine Schmidt, Vladimir Benes, Mikkel Noerholm, Andreas E. Kulozik, Matthias W. Hentze, and Martina U. Muckenthaler

A sensitive array for microRNA expression profiling (miChip) based on locked nucleic acids (LNA)
RNA 2006 12: 913-920. Published in Advance March 15, 2006 , 10.1261/rna.2332406 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE  

Katsiaryna Belaya, David Tollervey, and Martin Kos

FLIPing heterokaryons to analyze nucleo-cytoplasmic shuttling of yeast proteins
RNA 2006 12: 921-930. Published in Advance March 15, 2006 , 10.1261/rna.2301806 [Abstract] [Full Text] [PDF]  

Noah Levinson, Rochelle Hinman, Ashwini Patil, Corey R.J. Stephenson, Stefan Werner, Grace H.C. Woo, Jingbo Xiao, Peter Wipf, and Kristen W. Lynch

Use of transcriptional synergy to augment sensitivity of a splicing reporter assay
RNA 2006 12: 925-930. Published in Advance March 23, 2006 , 10.1261/rna.8306 [Abstract] [Full Text] [PDF]  

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